BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H01LP1|AL425934
(799 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig307 702 0.0
>3x_Contig307
Length = 1772
Score = 702 bits (354), Expect = 0.0
Identities = 368/370 (99%), Gaps = 2/370 (0%)
Strand = Plus / Plus
Query: 1 attttgacagatcagatagtcttcaataatgatatgttttctgatgatagggcaacagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 attttgacagatcagatagtcttcaataatgatatgttttctgatgatagggcaacagaa 1355
Query: 61 tctcagtttaaagggatcaaggattgctccgttggcaccatcagcgataccatgaaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 tctcagtttaaagggatcaaggattgctccgttggcaccatcagcgataccatgaaccag 1415
Query: 121 ctttttgggaatttttcaaagcttcacggaaacgaaataatagaggaagtcttctatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 ctttttgggaatttttcaaagcttcacggaaacgaaataatagaggaagtcttctatttg 1475
Query: 181 cctgaaccatcagtgtttgtgaagaaatctgaagatacaattaaaataaaaagctcatcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1476 cctgaaccatcagtgtttgtgaagaaatctgaagatacaattaaaataaaaagctcatcg 1535
Query: 241 tgttatttcacggaatatttaaatctgaaacccaaccgtggggtaaaaaatttcagggcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1536 tgttatttcacggaatatttaaatctgaaacccaaccgtggggtaaaaaatttcagggcc 1595
Query: 301 ctagtgctaaccactgaggcaaaaaatgattgcatgtcttt-cgtatcacaaatgtc-tc 358
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 1596 ctagtgctaaccactgaggcaaaaaatgattgcatgtctttccgtatcacaaatgtcatc 1655
Query: 359 agacatattc 368
||||||||||
Sbjct: 1656 agacatattc 1665
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6453
Number of Sequences: 1807
Number of extensions: 6453
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 799
length of database: 10,358,551
effective HSP length: 16
effective length of query: 783
effective length of database: 10,329,639
effective search space: 8088107337
effective search space used: 8088107337
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)